ENSG00000258839


Homo sapiens

Features
Gene ID: ENSG00000258839
  
Biological name :MC1R
  
Synonyms : MC1R / melanocortin 1 receptor / Q01726
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q24.3
Gene start: 89912119
Gene end: 89920977
  
Corresponding Affymetrix probe sets: 205458_at (Human Genome U133 Plus 2.0 Array)   220715_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000451760
Ensembl peptide - ENSP00000451605
Ensembl peptide - ENSP00000492011
NCBI entrez gene - 4157     See in Manteia.
OMIM - 155555
RefSeq - NM_002386
RefSeq Peptide - NP_002377
swissprot - Q1JUL4
swissprot - G3V4F0
swissprot - Q01726
Ensembl - ENSG00000258839
  
Related genetic diseases (OMIM): 203200 - {Albinism, oculocutaneous, type II, modifier of}, 203200
  266300 - [Skin/hair/eye pigmentation 2, blond hair/fair skin], 266300
  613098 - [Analgesia from kappa-opioid receptor agonist, female-specific], 613098
  613099 - {Melanoma, cutaneous malignant, 5}, 613099
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC092143.1ENSG00000198211100
Q13885 / TUBB2A / tubulin beta 2A class IIaENSG000001372672
P04350 / TUBB4A / tubulin beta 4A class IVaENSG000001048332
TUBB1 / Q9H4B7 / tubulin beta 1 class VIENSG000001011622
TUBB / P07437 / tubulin beta class IENSG000001962302
A6NNZ2 / TUBB8P12 / tubulin beta 8 pseudogene 12ENSG000001732132
P68371 / TUBB4B / tubulin beta 4B class IVbENSG000001882292
TUBB6 / Q9BUF5 / tubulin beta 6 class VENSG000001760142
TUBB8 / Q3ZCM7 / tubulin beta 8 class VIIIENSG000002614562
TUBB3 / Q13509 / tubulin beta 3 class IIIENSG000002589472
Q9BVA1 / TUBB2B / tubulin beta 2B class IIbENSG000001372852
TUBE1 / Q9UJT0 / tubulin epsilon 1ENSG000000749351
TUBD1 / Q9UJT1 / tubulin delta 1ENSG000001084231


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR000761  Melanocyte-stimulating hormone receptor
 IPR001671  Melanocortin/ACTH receptor
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger TAS
 biological_processGO:0007189 adenylate cyclase-activating G-protein coupled receptor signaling pathway IDA
 biological_processGO:0007275 multicellular organism development TAS
 biological_processGO:0009650 UV protection TAS
 biological_processGO:0010739 positive regulation of protein kinase A signaling ISS
 biological_processGO:0032720 negative regulation of tumor necrosis factor production IMP
 biological_processGO:0035556 intracellular signal transduction ISS
 biological_processGO:0043473 pigmentation TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0051897 positive regulation of protein kinase B signaling ISS
 biological_processGO:0070914 UV-damage excision repair IDA
 biological_processGO:0090037 positive regulation of protein kinase C signaling ISS
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0004977 melanocortin receptor activity TAS
 molecular_functionGO:0004980 melanocyte-stimulating hormone receptor activity IPI
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008528 G-protein coupled peptide receptor activity TAS
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI


Pathways (from Reactome)
Pathway description
Peptide ligand-binding receptors
G alpha (s) signalling events


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000238 Hydrocephalus 
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000488 Retinopathy 
Show

 HP:0000505 Impaired vision 
Show

 HP:0000587 Abnormality of the optic nerve "Abnormality of the optic nerve (also known as cranial nerve II), which transmits visual information from the retina to the brain." [HPO:curators]
Show

 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000958 Dry skin 
Show

 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
Show

 HP:0001022 Albinism 
Show

 HP:0001053 Hypopigmented skin patches 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001480 Freckling 
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 HP:0001482 Subcutaneous nodules 
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 HP:0001595 Hair abnormality 
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 HP:0002071 Extrapyramidal signs 
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 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
Show

 HP:0002671 Basal cell carcinoma 
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 HP:0002859 Rhabdomyosarcoma 
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 HP:0002861 Malignant melanoma "A malignant skin tumor of originating from melanocytes, pigment cells normally present in the epidermis and sometimes in the dermis." [HPO:curators]
Show

 HP:0002894 Pancreatic cancer 
Show

 HP:0003764 Abnormal or excess nevi 
Show

 HP:0005600 Giant pigmented hairy nevus, often in lumbosacral distribution 
Show

 HP:0006739 Squamous cell carcinoma of the skin "Squamous cell carcinoma of the skin is a malignant tumor of squamous epithelium." [HPO:curators]
Show

 HP:0006753 Increased gastric cancer 
Show

 HP:0007730 Reduced iris pigmentation 
Show

 HP:0012056 Cutaneous melanoma "The presence of a `melanoma` (MPATH:359) of the `skin` (FMA:7163)." [HPO:probinson]
Show

 HP:0100013 Neoplasia of the breast 
Show

 HP:0100763 Abnormality of the lymphatic system 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000115138 POMC / P01189 / proopiomelanocortin  / reaction / complex






 

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