ENSGALG00000014811


Gallus gallus

Features
Gene ID: ENSGALG00000014811
  
Biological name :SMCHD1
  
Synonyms : SMCHD1 / structural maintenance of chromosomes flexible hinge domain containing 1
  
Possible biological names infered from orthology : A6NHR9 / Q6P5D8 / Structural maintenance of chromosomes flexible hinge domain-containing protein 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 101375071
Gene end: 101449212
  
Corresponding Affymetrix probe sets: Gga.12925.1.S1_at (Chicken Array)   GgaAffx.9401.1.S1_at (Chicken Array)   GgaAffx.9402.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000023866
NCBI entrez gene - 421057     See in Manteia.
RefSeq - XM_015277951
RefSeq - XM_015277952
swissprot - E1C832
Ensembl - ENSGALG00000014811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smchd1ENSDARG00000104374Danio rerio
 A6NHR9ENSG00000101596Homo sapiens
 Q6P5D8ENSMUSG00000024054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003594  Histidine kinase/HSP90-like ATPase
 IPR010935  SMCs flexible hinge


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009048 dosage compensation by inactivation of X chromosome IEA
 biological_processGO:0043584 nose development IEA
 biological_processGO:0051276 chromosome organization IEA
 biological_processGO:0060821 inactivation of X chromosome by DNA methylation IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0001740 Barr body IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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