ENSGALG00000015400


Gallus gallus

Features
Gene ID: ENSGALG00000015400
  
Biological name :CGGBP1
  
Synonyms : CGGBP1 / CGG triplet repeat binding protein 1
  
Possible biological names infered from orthology : Mus musculus CGG triplet repeat binding protein 1 (Cggbp1), transcript variant 2, mRNA. / Q8BHG9 / Q9UFW8
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 88778331
Gene end: 88781892
  
Corresponding Affymetrix probe sets: GgaAffx.9812.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043978
Ensembl peptide - ENSGALP00000045245
NCBI entrez gene - 770224     See in Manteia.
RefSeq - XM_015297802
RefSeq - XM_015297805
RefSeq - XM_004938303
RefSeq - XM_015297795
swissprot - A0A1D5NUG1
Ensembl - ENSGALG00000015400
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CGGBP1ENSG00000163320Homo sapiens
 Cggbp1ENSMUSG00000054604Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033375  CGG triplet repeat-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr