ENSMUSG00000054604


Mus musculus

Features
Gene ID: ENSMUSG00000054604
  
Biological name :Cggbp1
  
Synonyms : Cggbp1 / Mus musculus CGG triplet repeat binding protein 1 (Cggbp1), transcript variant 2, mRNA. / Q8BHG9
  
Possible biological names infered from orthology : CGG triplet repeat binding protein 1 / Q9UFW8
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C1.3
Gene start: 64851996
Gene end: 64859507
  
Corresponding Affymetrix probe sets: 10436471 (MoGene1.0st)   1454641_at (Mouse Genome 430 2.0 Array)   1455658_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000065845
NCBI entrez gene - 106143     See in Manteia.
MGI - MGI:2146370
RefSeq - XM_006521658
RefSeq - NM_001357416
RefSeq - NM_178647
RefSeq Peptide - NP_848762
RefSeq Peptide - NP_001344345
swissprot - Q8BHG9
Ensembl - ENSMUSG00000054604
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CGGBP1ENSGALG00000015400Gallus gallus
 CGGBP1ENSG00000163320Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR033375  CGG triplet repeat-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding ISO
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003690 double-stranded DNA binding ISO
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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