ENSGALG00000015492


Gallus gallus

Features
Gene ID: ENSGALG00000015492
  
Biological name :PDZK1
  
Synonyms : PDZ domain containing 1 / PDZK1
  
Possible biological names infered from orthology : Na(+)/H(+) exchange regulatory cofactor NHE-RF3 / Q5T2W1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 92516395
Gene end: 92522811
  
Corresponding Affymetrix probe sets: Gga.10796.1.S1_s_at (Chicken Array)   Gga.11236.1.S1_at (Chicken Array)   GgaAffx.24692.1.S1_at (Chicken Array)   GgaAffx.24692.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024939
NCBI entrez gene - 418460     See in Manteia.
RefSeq - XM_416669
swissprot - F1NRR6
Ensembl - ENSGALG00000015492
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdzk1ENSDARG00000022261Danio rerio
 PDZK1ENSG00000174827Homo sapiens
 Pdzk1ENSMUSG00000038298Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDZD3 / PDZ domain containing 3 / Q86UT5*ENSGALG0000000677924
SLC9A3R2 / SLC9A3 regulator 2 / Q15599* / solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2*ENSGALG0000000560819
SLC9A3R1 / Na(+)/H(+) exchange regulatory cofactor NHE-RF1 / P70441* / O14745* / SLC9A3 regulator 1* / solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1*ENSGALG0000000765017


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015879 carnitine transport IEA
 biological_processGO:0032414 positive regulation of ion transmembrane transporter activity IEA
 biological_processGO:1904064 positive regulation of cation transmembrane transport IEA
 molecular_functionGO:0030165 PDZ domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr