ENSGALG00000015617


Gallus gallus

Features
Gene ID: ENSGALG00000015617
  
Biological name :RPS23
  
Synonyms : ribosomal protein S23 / RPS23
  
Possible biological names infered from orthology : 40S ribosomal protein S23 / P62266 / P62267
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 63359022
Gene end: 63360866
  
Corresponding Affymetrix probe sets: Gga.4516.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025130
Ensembl peptide - ENSGALP00000060079
Ensembl peptide - ENSGALP00000047469
NCBI entrez gene - 427323     See in Manteia.
RefSeq - XM_424903
swissprot - A0A1L1RMR3
swissprot - A0A1D5P462
swissprot - F1NDC2
Ensembl - ENSGALG00000015617
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps23ENSDARG00000021838Danio rerio
 RPS23ENSG00000186468Homo sapiens
 Rps23ENSMUSG00000049517Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005680  Ribosomal protein S23, eukaryotic/archaeal
 IPR006032  Ribosomal protein S12/S23
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0034063 stress granule assembly IEA
 biological_processGO:1990145 maintenance of translational fidelity IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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