ENSMUSG00000049517


Mus musculus

Features
Gene ID: ENSMUSG00000049517
  
Biological name :Rps23
  
Synonyms : 40S ribosomal protein S23 / P62267 / Rps23
  
Possible biological names infered from orthology : P62266 / ribosomal protein S23
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: C3
Gene start: 90922958
Gene end: 90924950
  
Corresponding Affymetrix probe sets: 10394733 (MoGene1.0st)   10406541 (MoGene1.0st)   10491730 (MoGene1.0st)   10532919 (MoGene1.0st)   10570980 (MoGene1.0st)   10576726 (MoGene1.0st)   1460175_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054490
NCBI entrez gene - 66475     See in Manteia.
MGI - MGI:1913725
RefSeq - NM_024175
RefSeq Peptide - NP_077137
swissprot - P62267
Ensembl - ENSMUSG00000049517
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps23ENSDARG00000021838Danio rerio
 RPS23ENSGALG00000015617Gallus gallus
 RPS23ENSG00000186468Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005680  Ribosomal protein S23, eukaryotic/archaeal
 IPR006032  Ribosomal protein S12/S23
 IPR012340  Nucleic acid-binding, OB-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IEA
 biological_processGO:0006412 translation ISO
 biological_processGO:0034063 stress granule assembly IEA
 biological_processGO:1990145 maintenance of translational fidelity IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015935 small ribosomal subunit IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 cellular_componentGO:0042788 polysomal ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome ISO


Pathways (from Reactome)
Pathway description
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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