ENSGALG00000017018


Gallus gallus

Features
Gene ID: ENSGALG00000017018
  
Biological name :INTS6
  
Synonyms : integrator complex subunit 6 / INTS6
  
Possible biological names infered from orthology : Q6PCM2 / Q9UL03
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 170099461
Gene end: 170140361
  
Corresponding Affymetrix probe sets: Gga.2737.1.S1_at (Chicken Array)   Gga.2737.2.S1_at (Chicken Array)   Gga.3739.1.S1_at (Chicken Array)   GgaAffx.21414.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027436
Ensembl peptide - ENSGALP00000058507
Ensembl peptide - ENSGALP00000055879
NCBI entrez gene - 418876     See in Manteia.
RefSeq - XM_015276100
RefSeq - XM_015276105
swissprot - E1BV07
swissprot - A0A1D5PZU0
swissprot - A0A1D5PSJ3
Ensembl - ENSGALG00000017018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ints6ENSDARG00000013025Danio rerio
 INTS6ENSG00000102786Homo sapiens
 Ints6ENSMUSG00000035161Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm648* / SAGE1* / Q8BND4* / Q5JSJ4* / Q5HYN5* / Q5DJT8* / P0DMV2* / CT45A1* / CT45A2* / CT45A3* / CT45A5* / CT45A6* / CT45A7* / CT45A8* / CT45A9* / P0DMU9* / Q9NXZ1* / Q8NHU0* / P0DMU8* / P...ENSGALG0000000615766


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR029307  INTS6/SAGE1/DDX26B/CT45, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016180 snRNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0032039 integrator complex IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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