ENSGALG00000017139


Gallus gallus

Features
Gene ID: ENSGALG00000017139
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q3U2E2 / Q9CU65 / Q9UBW7 / Q9UJ78 / zinc finger, MYM-type 2 / zinc finger, MYM-type 5 / zinc finger MYM-type containing 2 / zinc finger MYM-type containing 5 / ZMYM2 / ZMYM5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 179051034
Gene end: 179094239
  
Corresponding Affymetrix probe sets: Gga.10962.1.S1_at (Chicken Array)   GgaAffx.10983.1.S1_at (Chicken Array)   GgaAffx.25178.1.S1_at (Chicken Array)   GgaAffx.25179.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042785
Ensembl peptide - ENSGALP00000027631
NCBI entrez gene - 418954     See in Manteia.
RefSeq - XM_015279425
RefSeq - XM_015279388
RefSeq - XM_015279396
RefSeq - XM_004938814
RefSeq - XM_004938815
RefSeq - XM_015279343
RefSeq - XM_015279350
RefSeq - XM_015279361
RefSeq - XM_015279370
RefSeq - XM_015279380
swissprot - R4GKS9
swissprot - E1C164
Ensembl - ENSGALG00000017139
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zmym2ENSDARG00000027353Danio rerio
 ZMYM2ENSG00000121741Homo sapiens
 ZMYM5ENSG00000132950Homo sapiens
 Zmym2ENSMUSG00000021945Mus musculus
 Zmym5ENSMUSG00000040123Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZMYM6* / ZMYM4* / A2A791* / O95789* / Q5VZL5* / AC114490.2* / zinc finger, MYM-type 6* / zinc finger, MYM-type 4* / zinc finger MYM-type containing 4* / zinc finger MYM-type containing 6*ENSGALG0000000249942
ZMYM3 / zinc finger MYM-type containing 3 / Q14202* / Q9JLM4* / zinc finger, MYM-type 3*ENSGALG0000000553338
QRICH1 / glutamine rich 1 / Q2TAL8*ENSGALG0000000686718
ZMYM5* / ZMYM2* / Q9UBW7* / Q9UJ78* / Q3U2E2* / Q9CU65* / zinc finger, MYM-type 2* / zinc finger, MYM-type 5* / zinc finger MYM-type containing 2* / zinc finger MYM-type containing 5*ENSGALG000000434210


Protein motifs (from Interpro)
Interpro ID Name
 IPR010507  Zinc finger, MYM-type
 IPR011017  TRASH domain
 IPR021893  Protein of unknown function DUF3504


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007010 cytoskeleton organization IBA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0022604 regulation of cell morphogenesis IBA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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