ENSGALG00000017378


Gallus gallus

Features
Gene ID: ENSGALG00000017378
  
Biological name :CRTAC1
  
Synonyms : cartilage acidic protein 1 / CRTAC1
  
Possible biological names infered from orthology : Mus musculus cartilage acidic protein 1 (Crtac1), transcript variant 2, mRNA. / Q8R555 / Q9NQ79
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 22270053
Gene end: 22279635
  
Corresponding Affymetrix probe sets: GgaAffx.11137.1.S1_at (Chicken Array)   GgaAffx.4382.1.S1_at (Chicken Array)   GgaAffx.4382.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054777
Ensembl peptide - ENSGALP00000028010
NCBI entrez gene - 425346     See in Manteia.
RefSeq - XM_015288691
RefSeq - NM_001080211
RefSeq Peptide - NP_001073680
swissprot - A0A1D5PPH7
swissprot - F1NHW7
Ensembl - ENSGALG00000017378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 crtac1aENSDARG00000059826Danio rerio
 crtac1bENSDARG00000102517Danio rerio
 CRTAC1ENSG00000095713Homo sapiens
 Crtac1ENSMUSG00000042401Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001881  EGF-like calcium-binding domain
 IPR011519  ASPIC/UnbV
 IPR018097  EGF-like calcium-binding, conserved site
 IPR027039  Cartilage acidic protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007413 axonal fasciculation IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:1900121 negative regulation of receptor binding IEA
 cellular_componentGO:0030426 growth cone IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr