ENSMUSG00000042401


Mus musculus

Features
Gene ID: ENSMUSG00000042401
  
Biological name :Crtac1
  
Synonyms : Crtac1 / Mus musculus cartilage acidic protein 1 (Crtac1), transcript variant 2, mRNA. / Q8R555
  
Possible biological names infered from orthology : cartilage acidic protein 1 / Q9NQ79
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: C3
Gene start: 42283037
Gene end: 42431783
  
Corresponding Affymetrix probe sets: 10467749 (MoGene1.0st)   1426606_at (Mouse Genome 430 2.0 Array)   1452936_at (Mouse Genome 430 2.0 Array)   1459147_at (Mouse Genome 430 2.0 Array)   1459858_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044858
NCBI entrez gene - 72832     See in Manteia.
MGI - MGI:1920082
RefSeq - XM_006527373
RefSeq - NM_001356588
RefSeq - NM_145123
RefSeq - XM_006527370
RefSeq - XM_006527371
RefSeq - XM_006527372
RefSeq - XM_006527369
RefSeq Peptide - NP_660105
RefSeq Peptide - NP_001343517
swissprot - Q8R555
Ensembl - ENSMUSG00000042401
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 crtac1aENSDARG00000059826Danio rerio
 crtac1bENSDARG00000102517Danio rerio
 CRTAC1ENSGALG00000017378Gallus gallus
 CRTAC1ENSG00000095713Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001881  EGF-like calcium-binding domain
 IPR011519  ASPIC/UnbV
 IPR018097  EGF-like calcium-binding, conserved site
 IPR027039  Cartilage acidic protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007413 axonal fasciculation IMP
 biological_processGO:0021772 olfactory bulb development IMP
 biological_processGO:1900121 negative regulation of receptor binding IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0030426 growth cone IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005237 abnormal olfactory tract morphology "structural anomaly of the nervelike, white band composed primarily of nerve fibers originating from the mitral cells and tufted cells of the olfactory bulb, but also containing the scattered cells of the anterior olfactory nucleus " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:34460]
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Allelic Composition: Nfasctm1.1Brp/Nfasctm1.2Brp,Tg(Thy1-cre/ERT2)#Brp/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Crtac1tm1Kota/Crtac1tm1Kota,Rtn4rtm1Stmr/Rtn4rtm1Stmr
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0009450 abnormal axon fasiculation "anomaly in the process by which axons form into bundles" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Nfasctm1.1Brp/Nfasctm1.2Brp,Tg(Thy1-cre/ERT2)#Brp/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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