ENSGALG00000020005


Gallus gallus

Features
Gene ID: ENSGALG00000020005
  
Biological name :SFT2D1
  
Synonyms : SFT2D1 / SFT2 domain containing 1
  
Possible biological names infered from orthology : Gm12166 / Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant 2, mRNA. / predicted gene 12166 / Q5SSN7 / Q8WV19
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 42972131
Gene end: 43003469
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000031188
Ensembl peptide - ENSGALP00000061370
Ensembl peptide - ENSGALP00000046825
NCBI entrez gene - 769380     See in Manteia.
RefSeq - XM_001232142
RefSeq - XM_015284337
swissprot - A0A1L1RRD5
swissprot - A0A1D5P2D0
swissprot - F1NPE6
Ensembl - ENSGALG00000020005
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sft2d1ENSDARG00000007362Danio rerio
 Q8WV19ENSG00000198818Homo sapiens
 Q5SSN7ENSMUSG00000069899Mus musculus
 Q5SSN7ENSMUSG00000073468Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SFT2D2 / SFT2 domain containing 2 / O95562* / Q8VD57* / Vesicle transport protein SFT2B *ENSGALG0000001922867


Protein motifs (from Interpro)
Interpro ID Name
 IPR007305  Vesicle transport protein, Got1/SFT2-like
 IPR011691  Vesicle transport protein SFT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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