ENSMUSG00000073468


Mus musculus

Features
Gene ID: ENSMUSG00000073468
  
Biological name :Sft2d1
  
Synonyms : Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant 2, mRNA. / Q5SSN7 / Sft2d1
  
Possible biological names infered from orthology : Q8WV19 / SFT2 domain containing 1
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A1
Gene start: 8311102
Gene end: 8396852
  
Corresponding Affymetrix probe sets: 10385382 (MoGene1.0st)   10441646 (MoGene1.0st)   10453562 (MoGene1.0st)   1460656_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115640
Ensembl peptide - ENSMUSP00000115979
Ensembl peptide - ENSMUSP00000117294
NCBI entrez gene - 106489     See in Manteia.
MGI - MGI:1918689
RefSeq - XM_011246185
RefSeq - NM_001357890
RefSeq - NM_134114
RefSeq - XM_011246184
RefSeq Peptide - NP_598875
RefSeq Peptide - NP_001344819
swissprot - Q5SSN7
swissprot - D6RFQ7
Ensembl - ENSMUSG00000073468
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sft2d1ENSDARG00000007362Danio rerio
 SFT2D1ENSGALG00000020005Gallus gallus
 Q8WV19ENSG00000198818Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SSN7 / Gm12166 / predicted gene 12166 / Q8WV19* / SFT2D1* / SFT2 domain containing 1*ENSMUSG00000069899100
Q8VD57 / Sft2d2 / Vesicle transport protein SFT2B / O95562* / SFT2 domain containing 2*ENSMUSG0000004084863


Protein motifs (from Interpro)
Interpro ID Name
 IPR007305  Vesicle transport protein, Got1/SFT2-like
 IPR011691  Vesicle transport protein SFT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IBA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr