ENSMUSG00000040848


Mus musculus

Features
Gene ID: ENSMUSG00000040848
  
Biological name :Sft2d2
  
Synonyms : Q8VD57 / Sft2d2 / Vesicle transport protein SFT2B
  
Possible biological names infered from orthology : O95562 / SFT2 domain containing 2
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: H2.2
Gene start: 165174337
Gene end: 165194438
  
Corresponding Affymetrix probe sets: 10359713 (MoGene1.0st)   1425026_at (Mouse Genome 430 2.0 Array)   1425027_s_at (Mouse Genome 430 2.0 Array)   1435141_at (Mouse Genome 430 2.0 Array)   1435142_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000043537
Ensembl peptide - ENSMUSP00000142241
Ensembl peptide - ENSMUSP00000141801
NCBI entrez gene - 108735     See in Manteia.
MGI - MGI:1917362
RefSeq - NM_145512
RefSeq Peptide - NP_663487
swissprot - A0A0A6YY20
swissprot - A0A0A6YX21
swissprot - Q8VD57
Ensembl - ENSMUSG00000040848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SFT2D2ENSGALG00000019228Gallus gallus
 O95562ENSG00000213064Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5SSN7 / Gm12166 / predicted gene 12166 / Q8WV19* / SFT2D1* / SFT2 domain containing 1*ENSMUSG0000006989963
Q5SSN7 / Sft2d1 / Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant 2, mRNA. / Q8WV19* / SFT2 domain containing 1*ENSMUSG0000007346863


Protein motifs (from Interpro)
Interpro ID Name
 IPR007305  Vesicle transport protein, Got1/SFT2-like
 IPR011691  Vesicle transport protein SFT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr