ENSGALG00000020590


Gallus gallus

Features
Gene ID: ENSGALG00000020590
  
Biological name :SGF29
  
Synonyms : Q5ZL38 / SAGA-associated factor 29 / SGF29
  
Possible biological names infered from orthology : AC106782.1 / AC133555.3 / Q96ES7 / Q9DA08 / SAGA complex associated factor 29
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 29925894
Gene end: 29930188
  
Corresponding Affymetrix probe sets: Gga.5792.2.S1_s_at (Chicken Array)   GgaAffx.11999.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037055
Ensembl peptide - ENSGALP00000064305
Ensembl peptide - ENSGALP00000060200
Ensembl peptide - ENSGALP00000057718
Ensembl peptide - ENSGALP00000055232
Ensembl peptide - ENSGALP00000049776
NCBI entrez gene - 424726     See in Manteia.
RefSeq - NM_001031298
RefSeq - XM_015291058
RefSeq Peptide - NP_001026469
swissprot - A0A1D5PQR5
swissprot - A0A1L1RZM0
swissprot - Q5ZL38
swissprot - A0A1D5PAL3
swissprot - A0A1L1RN44
swissprot - A0A1D5PXM2
Ensembl - ENSGALG00000020590
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgf29ENSDARG00000002339Danio rerio
 AC106782.1ENSG00000258130Homo sapiens
 AC133555.3ENSG00000258150Homo sapiens
 SGF29ENSG00000176476Homo sapiens
 Sgf29ENSMUSG00000030714Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR010750  SGF29 tudor-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016573 histone acetylation ISS
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005671 Ada2/Gcn5/Ada3 transcription activator complex ISS
 cellular_componentGO:0070461 SAGA-type complex ISS
 molecular_functionGO:0035064 methylated histone binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr