ENSMUSG00000030714


Mus musculus

Features
Gene ID: ENSMUSG00000030714
  
Biological name :Sgf29
  
Synonyms : Q9DA08 / SAGA-associated factor 29 / Sgf29
  
Possible biological names infered from orthology : AC106782.1 / AC133555.3
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F3
Gene start: 126649309
Gene end: 126672925
  
Corresponding Affymetrix probe sets: 10557439 (MoGene1.0st)   1437592_x_at (Mouse Genome 430 2.0 Array)   1451166_a_at (Mouse Genome 430 2.0 Array)   1451167_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000032956
Ensembl peptide - ENSMUSP00000146122
Ensembl peptide - ENSMUSP00000145680
Ensembl peptide - ENSMUSP00000145654
Ensembl peptide - ENSMUSP00000145562
NCBI entrez gene - 75565     See in Manteia.
MGI - MGI:1922815
RefSeq - XM_017312365
RefSeq - NM_029339
RefSeq Peptide - NP_083615
swissprot - A0A0U1RNH1
swissprot - A0A0U1RNS1
swissprot - A0A0U1RPT9
swissprot - Q9DA08
swissprot - A0A0U1RNP8
Ensembl - ENSMUSG00000030714
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgf29ENSDARG00000002339Danio rerio
 SGF29ENSGALG00000020590Gallus gallus
 AC106782.1ENSG00000258130Homo sapiens
 AC133555.3ENSG00000258150Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010750  SGF29 tudor-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0016573 histone acetylation ISS
 biological_processGO:0043966 histone H3 acetylation ISO
 cellular_componentGO:0000124 SAGA complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005671 Ada2/Gcn5/Ada3 transcription activator complex ISS
 cellular_componentGO:0070461 SAGA-type complex ISS
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0035064 methylated histone binding ISS
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000745 tremors "repetitive, cyclical movements of the body or a body part; usually involuntary, but can also manifest in response to an attempt at movement" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

 MP:0005560 decreased circulating glucose level "less than the normal concentration in the blood of this major monosaccharide of the body; it is an important energy source" [RGD:Rat Genome Database submission, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Otud7btm1(NCOM)Cmhd/Otud7btm1(NCOM)Cmhd
Genetic Background: C57BL/6N-Otud7btm1(NCOM)Cmhd/Tcp

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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