ENSGALG00000020747


Gallus gallus

Features
Gene ID: ENSGALG00000020747
  
Biological name :MBD4
  
Synonyms : MBD4 / methyl-CpG-binding domain protein 4
  
Possible biological names infered from orthology : methyl-CpG binding domain 4, DNA glycosylase / O95243
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 19516153
Gene end: 19519229
  
Corresponding Affymetrix probe sets: Gga.3616.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000032601
NCBI entrez gene - 395428     See in Manteia.
RefSeq - NM_204693
RefSeq Peptide - NP_990024
swissprot - F1P366
Ensembl - ENSGALG00000020747
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mbd4ENSDARG00000110298Danio rerio
 MBD4ENSG00000129071Homo sapiens
 Mbd4ENSMUSG00000030322Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003265  HhH-GPD domain
 IPR011257  DNA glycosylase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IBA
 biological_processGO:0009314 response to radiation IBA
 cellular_componentGO:0000785 chromatin IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0008263 pyrimidine-specific mismatch base pair DNA N-glycosylase activity IEA


Pathways (from Reactome)
Pathway description
Cleavage of the damaged pyrimidine


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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