ENSDARG00000110298


Danio rerio

Features
Gene ID: ENSDARG00000110298
  
Biological name :mbd4
  
Synonyms : mbd4 / methyl-CpG binding domain protein 4
  
Possible biological names infered from orthology : methyl-CpG binding domain 4, DNA glycosylase / O95243
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 54211861
Gene end: 54216499
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145483
NCBI entrez gene - 101887128     See in Manteia.
swissprot - A0A097ZPG7
ZFIN ID - ZDB-GENE-040213-1
Ensembl - ENSDARG00000110298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MBD4ENSGALG00000020747Gallus gallus
 MBD4ENSG00000129071Homo sapiens
 Mbd4ENSMUSG00000030322Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mecp2 / methyl CpG binding protein 2 / P51608* / Q9Z2D6*ENSDARG000000142187


Protein motifs (from Interpro)
Interpro ID Name
 IPR011257  DNA glycosylase
 IPR017352  Methyl-CpG-binding domain protein 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0008263 pyrimidine-specific mismatch base pair DNA N-glycosylase activity IEA


Pathways (from Reactome)
Pathway description
Cleavage of the damaged pyrimidine
Displacement of DNA glycosylase by APEX1


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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