ENSGALG00000024272


Gallus gallus

Features
Gene ID: ENSGALG00000024272
  
Biological name :S100A9
  
Synonyms : P28318 / Protein MRP-126 / S100A9
  
Possible biological names infered from orthology : P80511 / S100A12 / S100 calcium binding protein A12
  
Species: Gallus gallus
  
Chr. number: 25
Strand: 1
Band:
Gene start: 1885186
Gene end: 1886619
  
Corresponding Affymetrix probe sets: Gga.740.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022671
NCBI entrez gene - 426356     See in Manteia.
RefSeq - NM_001305151
RefSeq Peptide - NP_001292080
swissprot - P28318
Ensembl - ENSGALG00000024272
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P80511ENSG00000163221Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR028475  Protein S100-A9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006805 xenobiotic metabolic process IEA
 biological_processGO:0031640 killing of cells of other organism IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0050727 regulation of inflammatory response IEA
 biological_processGO:0050832 defense response to fungus IEA
 biological_processGO:0061844 antimicrobial humoral immune response mediated by antimicrobial peptide IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0035662 Toll-like receptor 4 binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050544 arachidonic acid binding IEA
 molecular_functionGO:0050786 RAGE receptor binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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