ENSGALG00000025609


Gallus gallus

Features
Gene ID: ENSGALG00000025609
  
Biological name :RF00003
  
Synonyms : RF00003
  
Possible biological names infered from orthology : Gm23464 / Gm23738 / Gm24036 / Gm24200 / Gm25134 / predicted gene, 23464 / predicted gene, 23738 / predicted gene, 24036 / predicted gene, 24200 / predicted gene, 25134 / RNA, U1 small nuclear 65, pseudogene / RNA, U1 small nuclear 80, pseudogene / RNU1-65P / RNU1-80P
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 122405125
Gene end: 122405288
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSGALG00000025609
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNU1-65PENSG00000200789Homo sapiens
 RNU1-80PENSG00000238898Homo sapiens
 Gm23464ENSMUSG00000065079Mus musculus
 Gm23738ENSMUSG00000064762Mus musculus
 Gm24036ENSMUSG00000064802Mus musculus
 Gm24200ENSMUSG00000064889Mus musculus
 Gm25134ENSMUSG00000064580Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002820274
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004076274
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002693274
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002908774
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004008174
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002876674
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003206274
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003101174
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002615874
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004316874
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000003431569
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000001793368
RF00003 / RNU1-58P* / RNA, U1 small nuclear 58, pseudogene*ENSGALG0000001793868
RF00003 / Gm23972* / predicted gene, 23972*ENSGALG0000001793268
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001795466
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001792366
RF00003 / Gm26170* / RNU1-93P* / predicted gene, 26170* / RNA, U1 small nuclear 93, pseudogene*ENSGALG0000001795364
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000003334959
RF00003ENSGALG0000002569656
RF00003 / Gm23827* / Gm23980* / Gm24014* / Gm24192* / Gm24720* / Gm24788* / Gm25481* / Gm25728* / Gm25938* / RNU1-6P* / Gm22945* / RNU1-5P* / RNU1-68P* / RNU1-143P* / predicted gene, 24720*...ENSGALG0000002569355


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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