ENSGALG00000034315


Gallus gallus

Features
Gene ID: ENSGALG00000034315
  
Biological name :RF00003
  
Synonyms : RF00003
  
Possible biological names infered from orthology : Gm23050 / Gm23294 / Gm23692 / Gm24671 / Gm24725 / Gm24959 / Gm24961 / Gm25153 / Gm25589 / Gm25730 / Gm26057 / predicted gene, 23050 / predicted gene, 23294 / predicted gene, 23692 / predicted gene, 24671 / predicted gene, 24725 / predicted gene, 24959 / predicted gene, 24961 / predicted gene, 25153 / predicted gene, 25589 / predicted gene, 25730 / predicted gene, 26057 / RNA, U1 small nuclear 125, pseudogene / RNU1-125P
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 92118959
Gene end: 92119120
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSGALG00000034315
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNU1-125PENSG00000252561Homo sapiens
 Gm23050ENSMUSG00000095980Mus musculus
 Gm23294ENSMUSG00000077338Mus musculus
 Gm23692ENSMUSG00000075829Mus musculus
 Gm24671ENSMUSG00000077347Mus musculus
 Gm24725ENSMUSG00000088854Mus musculus
 Gm24959ENSMUSG00000088549Mus musculus
 Gm24961ENSMUSG00000088543Mus musculus
 Gm25153ENSMUSG00000087743Mus musculus
 Gm25589ENSMUSG00000064436Mus musculus
 Gm25730ENSMUSG00000095446Mus musculus
 Gm26057ENSMUSG00000094369Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002693290
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003101190
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004076290
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002908790
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004008190
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002876690
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002615890
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000004316890
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000003206290
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000002820290
RF00003 / Rnu1b2* / Rnu1b1* / Rnu1b6* / Gm24830* / Gm24136* / Gm24405* / Gm24621* / Gm26232* / Gm22042* / Gm22614* / Gm25890* / Gm26110* / predicted gene, 24405* / predicted gene, 22042* / ...ENSGALG0000001793385
RF00003 / RNU1-58P* / RNA, U1 small nuclear 58, pseudogene*ENSGALG0000001793878
RF00003 / Gm26170* / RNU1-93P* / predicted gene, 26170* / RNA, U1 small nuclear 93, pseudogene*ENSGALG0000001795377
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001792377
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000001795476
RF00003 / Gm23294* / Gm23692* / Gm24671* / Gm24725* / Gm24959* / Gm24961* / Gm25153* / Gm25589* / Gm25730* / Gm26057* / Gm23050* / RNU1-125P* / predicted gene, 23050* / predicted gene, 2467...ENSGALG0000003334975
RF00003 / Gm23972* / predicted gene, 23972*ENSGALG0000001793275
RF00003 / Gm23738* / Gm24200* / Gm25134* / Gm24036* / Gm23464* / RNU1-80P* / RNU1-65P* / predicted gene, 23464* / predicted gene, 24036* / predicted gene, 23738* / predicted gene, 24200* / ...ENSGALG0000002560970
RF00003ENSGALG0000002569665
RF00003 / Gm25587* / RNU1-16P* / RNU1-141P* / predicted gene, 25587* / RNA, U1 small nuclear 16, pseudogene* / RNA, U1 small nuclear 141, pseudogene*ENSGALG0000002561964


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr