ENSGALG00000025887


Gallus gallus

Features
Gene ID: ENSGALG00000025887
  
Biological name :ATF3
  
Synonyms : activating transcription factor 3 / ATF3
  
Possible biological names infered from orthology : Cyclic AMP-dependent transcription factor ATF-3 / P18847 / Q60765
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 21874342
Gene end: 21876244
  
Corresponding Affymetrix probe sets: Gga.17638.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043167
NCBI entrez gene - 421369     See in Manteia.
RefSeq - XM_015283875
RefSeq - XM_015283877
RefSeq - XM_015283878
RefSeq - XM_015283879
RefSeq - XM_015283874
swissprot - R4GLS6
Ensembl - ENSGALG00000025887
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atf3ENSDARG00000007823Danio rerio
 ATF3ENSG00000162772Homo sapiens
 Atf3ENSMUSG00000026628Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
JDP2 / Jun dimerization protein 2 / P97875* / Q8WYK2*ENSGALG0000001032245


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029812  cAMP-dependent transcription factor ATF-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006094 gluconeogenesis IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IEA
 biological_processGO:0034198 cellular response to amino acid starvation IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0070373 negative regulation of ERK1 and ERK2 cascade IEA
 biological_processGO:1903984 positive regulation of TRAIL-activated apoptotic signaling pathway IEA
 biological_processGO:1990440 positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:1990622 CHOP-ATF3 complex IEA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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