ENSGALG00000027035


Gallus gallus

Features
Gene ID: ENSGALG00000027035
  
Biological name :RPL21
  
Synonyms : ribosomal protein L21 / RPL21
  
Possible biological names infered from orthology : P46778
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 176337051
Gene end: 176342505
  
Corresponding Affymetrix probe sets: Gga.16875.1.S1_at (Chicken Array)   Gga.20007.1.S1_at (Chicken Array)   Gga.4572.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043944
Ensembl peptide - ENSGALP00000061930
Ensembl peptide - ENSGALP00000059533
Ensembl peptide - ENSGALP00000059286
Ensembl peptide - ENSGALP00000041993
NCBI entrez gene - 418933     See in Manteia.
RefSeq - XM_001233392
RefSeq - XM_417127
swissprot - A0A1L1RSZ3
swissprot - A0A1L1RLB0
swissprot - A0A1D5NUC9
swissprot - R4GIQ2
Ensembl - ENSGALG00000027035
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl21ENSDARG00000010516Danio rerio
 RPL21ENSG00000122026Homo sapiens
 Rpl21ENSMUSG00000041453Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001147  Ribosomal protein L21e
 IPR008991  Translation protein SH3-like domain superfamily
 IPR018259  Ribosomal protein L21e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr