ENSGALG00000029706


Gallus gallus

Features
Gene ID: ENSGALG00000029706
  
Biological name :RUFY1
  
Synonyms : RUFY1 / RUN and FYVE domain-containing protein 1
  
Possible biological names infered from orthology : Q8BIJ7 / Q96T51 / RUN and FYVE domain containing 1
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 13595281
Gene end: 13608782
  
Corresponding Affymetrix probe sets: Gga.13757.1.A1_at (Chicken Array)   Gga.16185.1.S1_at (Chicken Array)   Gga.9796.1.S1_at (Chicken Array)   GgaAffx.26683.1.S1_at (Chicken Array)   GgaAffx.26683.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058000
NCBI entrez gene - 426519     See in Manteia.
RefSeq - NM_001257269
RefSeq Peptide - NP_001244198
swissprot - A0A1D5PYE9
Ensembl - ENSGALG00000029706
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rufy1ENSDARG00000078685Danio rerio
 RUFY1ENSG00000176783Homo sapiens
 Rufy1ENSMUSG00000020375Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RUFY3 / RUN and FYVE domain containing 3 / Q7L099* / Q9D394* / Protein RUFY3 *ENSGALG0000001156444
RUFY2* / Q8R4C2* / Q8WXA3* / RUN and FYVE domain containing 2*ENSGALG0000003916122
RUFY2* / Q8R4C2* / Q8WXA3* / RUN and FYVE domain containing 2*ENSGALG0000000399018
RUNDC3A / RUN domain containing 3A / O08576* / Q59EK9* / RUN domain-containing protein 3A *ENSGALG0000002651815
RUNDC3B / RUN domain containing 3B / Q6PDC0* / Q96NL0*ENSGALG0000000895412


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR004012  RUN domain
 IPR009053  Prefoldin
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030100 regulation of endocytosis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0008565 protein transporter activity IEA
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0042169 SH2 domain binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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