ENSGALG00000032993


Gallus gallus

Features
Gene ID: ENSGALG00000032993
  
Biological name :FTSJ3
  
Synonyms : FTSJ3 / pre-rRNA processing protein FTSJ3
  
Possible biological names infered from orthology : FtsJ RNA methyltransferase homolog 3 / Q8IY81 / Q9DBE9
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 1865257
Gene end: 1872063
  
Corresponding Affymetrix probe sets: GgaAffx.12166.1.S1_at (Chicken Array)   GgaAffx.204.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054562
Ensembl peptide - ENSGALP00000057026
NCBI entrez gene - 419943     See in Manteia.
RefSeq - NM_001030925
RefSeq - XM_015299314
RefSeq - XM_015299315
RefSeq Peptide - NP_001026096
swissprot - A0A1D5PVQ1
swissprot - A0A1D5PNW7
Ensembl - ENSGALG00000032993
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ftsj3ENSDARG00000104938Danio rerio
 FTSJ3ENSG00000108592Homo sapiens
 Ftsj3ENSMUSG00000020706Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002877  Ribosomal RNA methyltransferase FtsJ domain
 IPR012920  Ribosomal RNA methyltransferase, Spb1, C-terminal
 IPR015507  Ribosomal RNA large subunit methyltransferase E
 IPR024576  Ribosomal RNA methyltransferase Spb1, domain of unknown function DUF3381
 IPR028589  AdoMet-dependent rRNA methyltransferase, Spb1
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000453 enzyme-directed rRNA 2"-O-methylation IEA
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0031167 rRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030688 preribosome, small subunit precursor IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008649 rRNA methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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