ENSGALG00000033739


Gallus gallus

Features
Gene ID: ENSGALG00000033739
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 135051211
Gene end: 135052548
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000044892
Ensembl peptide - ENSGALP00000057921
Ensembl peptide - ENSGALP00000051305
Ensembl peptide - ENSGALP00000047857
Ensembl peptide - ENSGALP00000045084
NCBI entrez gene - 107051987     See in Manteia.
RefSeq - XM_015277928
RefSeq - XM_015277929
swissprot - A0A1D5P590
swissprot - A0A1D5PY72
swissprot - A0A1D5NWZ9
swissprot - A0A1D5NXI8
swissprot - A0A1D5PEU6
Ensembl - ENSGALG00000033739
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POU3F2 / POU class 3 homeobox 2 / P20265* / P31360* / POU domain, class 3, transcription factor 2*ENSGALG0000003842557
POU3F4 / POU class 3 homeobox 4 / P49335* / P62515* / POU domain, class 3, transcription factor 4*ENSGALG0000002932937
POU2F1 / POU domain, class 2, transcription factor 1 / P14859* / P25425* / POU class 2 homeobox 1*ENSGALG0000001544635
Pou5f3 / POU domain class 5 transcription factor 3 isoform 1 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / P...ENSGALG0000003148231
POU2F3 / POU class 2 homeobox 3 / Q9UKI9* / POU domain, class 2, transcription factor 3*ENSGALG0000000667331
POU1F1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSGALG0000001549525
POU4F2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSGALG0000003709424
POU4F3 / Q91998 / Brain-specific homeobox/POU domain protein 3 ENSGALG0000003456724
POU4F1 / POU class 4 homeobox 1 / P17208* / Q01851* / POU domain, class 4, transcription factor 1 *ENSGALG0000003544123
POU4F3 / POU class 4 homeobox 3 / Q15319* / Q63955* / POU domain, class 4, transcription factor 3 *ENSGALG0000004333420


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR016362  POU-domain transcription factor, class 3
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007420 brain development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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