ENSGALG00000015446


Gallus gallus

Features
Gene ID: ENSGALG00000015446
  
Biological name :POU2F1
  
Synonyms : POU2F1 / POU domain, class 2, transcription factor 1
  
Possible biological names infered from orthology : P14859 / P25425 / POU class 2 homeobox 1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 91662967
Gene end: 91748448
  
Corresponding Affymetrix probe sets: Gga.836.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058555
Ensembl peptide - ENSGALP00000029768
NCBI entrez gene - 396463     See in Manteia.
RefSeq - XM_015295915
RefSeq - XM_015295899
RefSeq - XM_015295902
RefSeq - XM_015295906
RefSeq - NM_205472
RefSeq - XM_015295868
RefSeq - XM_015295876
RefSeq - XM_015295883
RefSeq - XM_015295887
RefSeq - XM_015295892
RefSeq Peptide - NP_990803
swissprot - F1NSK6
swissprot - A0A1D5PZY6
Ensembl - ENSGALG00000015446
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pou2f1bENSDARG00000007996Danio rerio
 P14859ENSG00000143190Homo sapiens
 P25425ENSMUSG00000026565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POU2F3 / POU class 2 homeobox 3 / Q9UKI9* / POU domain, class 2, transcription factor 3*ENSGALG0000000667326
ENSGALG0000003373919
POU3F2 / POU class 3 homeobox 2 / P20265* / P31360* / POU domain, class 3, transcription factor 2*ENSGALG0000003842517
Pou5f3 / POU domain class 5 transcription factor 3 isoform 1 / POU5F2* / Q8N7G0* / P20263* / POU5F1* / Q01860* / Q06416* / POU5F1B* / POU class 5 homeobox 1* / POU class 5 homeobox 1B* / P...ENSGALG0000003148214
POU3F4 / POU class 3 homeobox 4 / P49335* / P62515* / POU domain, class 3, transcription factor 4*ENSGALG0000002932914
POU1F1 / POU class 1 homeobox 1 / P28069* / Q00286* / POU domain, class 1, transcription factor 1*ENSGALG0000001549513
POU4F3 / Q91998 / Brain-specific homeobox/POU domain protein 3 ENSGALG0000003456712
POU4F1 / POU class 4 homeobox 1 / P17208* / Q01851* / POU domain, class 4, transcription factor 1 *ENSGALG0000003544112
POU4F2 / POU class 4 homeobox 2 / Q12837* / Q63934* / POU domain, class 4, transcription factor 2 *ENSGALG0000003709412
POU4F3 / POU class 4 homeobox 3 / Q15319* / Q63955* / POU domain, class 4, transcription factor 3 *ENSGALG0000004333411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000327  POU-specific domain
 IPR000972  Octamer-binding transcription factor
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR013847  POU domain
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IEA
 molecular_functionGO:0000979 RNA polymerase II core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000983 transcription factor activity, RNA polymerase II core promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001223 transcription coactivator binding IPI
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
RNA polymerase II transcribes snRNA genes
RNA Polymerase III Transcription Initiation From Type 3 Promoter
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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