ENSGALG00000034625


Gallus gallus

Features
Gene ID: ENSGALG00000034625
  
Biological name :TCEB3
  
Synonyms : TCEB3 / transcription elongation factor B polypeptide 3
  
Possible biological names infered from orthology : A6NLF2 / ELOA / ELOA2 / ELOA3 / ELOA3B / ELOA3C / ELOA3D / elongin A / elongin A2 / elongin A3 / elongin A3 family member B / elongin A3 family member C / elongin A3 family member D / Q14241 / Q3SY89 / Q8CB77 / Q8IYF1 / Q8NG57
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 5585953
Gene end: 5598443
  
Corresponding Affymetrix probe sets: Gga.17063.1.S1_s_at (Chicken Array)   GgaAffx.12949.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049710
NCBI entrez gene - 419683     See in Manteia.
RefSeq - NM_001030905
RefSeq - XM_015297671
RefSeq Peptide - NP_001026076
swissprot - A0A1D5PAE7
Ensembl - ENSGALG00000034625
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eloaENSDARG00000102365Danio rerio
 A6NLF2ENSG00000274744Homo sapiens
 ELOAENSG00000011007Homo sapiens
 ELOA2ENSG00000206181Homo sapiens
 ELOA3ENSG00000183791Homo sapiens
 ELOA3BENSG00000278674Homo sapiens
 ELOA3CENSG00000275553Homo sapiens
 EloaENSMUSG00000028668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000004663720


Protein motifs (from Interpro)
Interpro ID Name
 IPR001810  F-box domain
 IPR003617  Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
 IPR010684  RNA polymerase II transcription factor SIII, subunit A
 IPR017923  Transcription factor IIS, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0070449 elongin complex IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase II Pre-transcription Events
TP53 Regulates Transcription of DNA Repair Genes
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr