ENSGALG00000034769


Gallus gallus

Features
Gene ID: ENSGALG00000034769
  
Biological name :USP12-like
  
Synonyms : USP12-like
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 12300508
Gene end: 12328799
  
Corresponding Affymetrix probe sets: Gga.1276.1.S1_at (Chicken Array)   GgaAffx.4813.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057661
Ensembl peptide - ENSGALP00000063364
NCBI entrez gene - 422322     See in Manteia.
RefSeq - NM_001307997
RefSeq - XM_015278291
RefSeq - XM_015278292
RefSeq Peptide - NP_001294926
swissprot - A0A1L1RWY9
swissprot - A0A1D5PXG6
Ensembl - ENSGALG00000034769
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp12bENSDARG00000074367Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP12 / ubiquitin specific peptidase 12 / O75317* / Q9D9M2*ENSGALG0000003470891
USP46 / ubiquitin specific peptidase 46 / P62068* / P62069*ENSGALG0000003749690
USP38 / ubiquitin specific peptidase 38 / Q8BW70* / Q8NB14*ENSGALG0000000988632
USP35 / ubiquitin specific peptidase 35 / Q9P2H5*ENSGALG0000003500731


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr