ENSGALG00000034708


Gallus gallus

Features
Gene ID: ENSGALG00000034708
  
Biological name :USP12
  
Synonyms : ubiquitin specific peptidase 12 / USP12
  
Possible biological names infered from orthology : O75317 / Q9D9M2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 176357322
Gene end: 176388427
  
Corresponding Affymetrix probe sets: GgaAffx.10954.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053198
Ensembl peptide - ENSGALP00000058089
NCBI entrez gene - 428078     See in Manteia.
RefSeq - XM_015278916
RefSeq - XM_015278923
RefSeq - XM_015278927
RefSeq - XM_015278936
swissprot - A0A1D5PYN4
swissprot - A0A1D5PK45
Ensembl - ENSGALG00000034708
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A4FUN7ENSDARG00000078109Danio rerio
 USP12ENSG00000152484Homo sapiens
 Usp12ENSMUSG00000029640Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP12-likeENSGALG0000003476991
USP46 / ubiquitin specific peptidase 46 / P62068* / P62069*ENSGALG0000003749688
USP38 / ubiquitin specific peptidase 38 / Q8BW70* / Q8NB14*ENSGALG0000000988631
USP35 / ubiquitin specific peptidase 35 / Q9P2H5*ENSGALG0000003500730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:0101005 ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000006052 WDR48 / Q5F3K4 / WD repeat-containing protein 48 / Q8TAF3* / Q8BH57* / WD repeat domain 48*  / complex






 

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contact: otassy@igbmc.fr