ENSGALG00000035140


Gallus gallus

Features
Gene ID: ENSGALG00000035140
  
Biological name :TMEM106B
  
Synonyms : TMEM106B / transmembrane protein 106B
  
Possible biological names infered from orthology : Q80X71 / Q9NUM4
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 26625916
Gene end: 26756149
  
Corresponding Affymetrix probe sets: Gga.16542.1.S1_at (Chicken Array)   GgaAffx.20299.1.S1_at (Chicken Array)   GgaAffx.20299.1.S1_s_at (Chicken Array)   GgaAffx.6773.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054918
Ensembl peptide - ENSGALP00000056588
NCBI entrez gene - 420586     See in Manteia.
RefSeq - NM_001012558
RefSeq - XM_015281406
RefSeq Peptide - NP_001012576
swissprot - Q5F3Z0
Ensembl - ENSGALG00000035140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmem106bbENSDARG00000035949Danio rerio
 Q9NUM4ENSG00000106460Homo sapiens
 Q80X71ENSMUSG00000029571Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009790  Protein of unknown function DUF1356, TMEM106


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0007041 lysosomal transport IEA
 biological_processGO:0032418 lysosome localization IEA
 biological_processGO:0048813 dendrite morphogenesis IEA
 biological_processGO:1900006 positive regulation of dendrite development IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr