ENSGALG00000039728


Gallus gallus

Features
Gene ID: ENSGALG00000039728
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 22707663
Gene end: 22711730
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000057266
NCBI entrez gene - 777244     See in Manteia.
RefSeq - XM_015291786
swissprot - A0A1D5PWD5
Ensembl - ENSGALG00000039728
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SHOX / short stature homeobox / O15266*ENSGALG0000001669861
OTP / orthopedia homeobox / O09113* / Q5XKR4* / Homeobox protein orthopedia *ENSGALG0000002674425


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr