ENSGALG00000040109


Gallus gallus

Features
Gene ID: ENSGALG00000040109
  
Biological name :LARP1
  
Synonyms : La ribonucleoprotein domain family member 1 / LARP1
  
Possible biological names infered from orthology : La-related protein 1 / Q6PKG0 / Q6ZQ58
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 12056462
Gene end: 12099062
  
Corresponding Affymetrix probe sets: Gga.16815.1.S1_at (Chicken Array)   Gga.18098.1.S1_s_at (Chicken Array)   Gga.5925.1.S1_at (Chicken Array)   GgaAffx.26089.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051703
NCBI entrez gene - 416258     See in Manteia.
RefSeq - XM_015293912
RefSeq - XM_015293915
RefSeq - XM_015293913
RefSeq - XM_015293914
swissprot - A0A1D5PFY6
Ensembl - ENSGALG00000040109
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp1ENSDARG00000101722Danio rerio
 LARP1ENSG00000155506Homo sapiens
 Larp1ENSMUSG00000037331Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP1B / La ribonucleoprotein domain family member 1B / Q659C4*ENSGALG0000001020751


Protein motifs (from Interpro)
Interpro ID Name
 IPR006607  Protein of unknown function DM15
 IPR006630  La-type HTH domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0016239 positive regulation of macroautophagy IEA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0031929 TOR signaling IEA
 biological_processGO:0038202 TORC1 signaling IEA
 biological_processGO:0045070 positive regulation of viral genome replication IEA
 biological_processGO:0048255 mRNA stabilization IEA
 biological_processGO:0072752 cellular response to rapamycin IEA
 biological_processGO:1990928 response to amino acid starvation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0031931 TORC1 complex IEA
 molecular_functionGO:0000339 RNA cap binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0008190 eukaryotic initiation factor 4E binding IEA
 molecular_functionGO:0008494 translation activator activity IEA
 molecular_functionGO:0031369 translation initiation factor binding IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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