ENSGALG00000040770


Gallus gallus

Features
Gene ID: ENSGALG00000040770
  
Biological name :TNRC18
  
Synonyms : TNRC18 / trinucleotide repeat containing 18
  
Possible biological names infered from orthology : O15417 / trinucleotide repeat-containing 18 protein isoform A
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 4101243
Gene end: 4145400
  
Corresponding Affymetrix probe sets: Gga.14216.1.S1_at (Chicken Array)   Gga.5782.1.S1_at (Chicken Array)   GgaAffx.2819.1.S1_at (Chicken Array)   GgaAffx.2820.1.S1_at (Chicken Array)   GgaAffx.2852.1.S1_at (Chicken Array)   GgaAffx.2853.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045821
Ensembl peptide - ENSGALP00000047121
NCBI entrez gene - 416482     See in Manteia.
RefSeq - XM_004945156
swissprot - A0A1D5NZK3
swissprot - A0A1D5P366
Ensembl - ENSGALG00000040770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnrc18ENSDARG00000077052Danio rerio
 O15417ENSG00000182095Homo sapiens
 Tnrc18ENSMUSG00000039477Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BAHCC1 / BAH domain and coiled-coil containing 1 / Q3UHR0* / Mus musculus BAH domain and coiled-coil containing 1 (Bahcc1), transcript variant 2, mRNA.*ENSGALG0000004030815


Protein motifs (from Interpro)
Interpro ID Name
 IPR001025  Bromo adjacent homology (BAH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0003682 chromatin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr