ENSGALG00000041204


Gallus gallus

Features
Gene ID: ENSGALG00000041204
  
Biological name :IGF2BP1
  
Synonyms : IGF2BP1 / Insulin-like growth factor 2 mRNA-binding protein 1 / O42254
  
Possible biological names infered from orthology : O88477 / Q9NZI8
  
Species: Gallus gallus
  
Chr. number: 27
Strand: -1
Band:
Gene start: 3648588
Gene end: 4003342
  
Corresponding Affymetrix probe sets: Gga.567.1.S1_at (Chicken Array)   GgaAffx.8871.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052713
Ensembl peptide - ENSGALP00000053168
Ensembl peptide - ENSGALP00000051506
NCBI entrez gene - 395953     See in Manteia.
RefSeq - NM_205071
RefSeq Peptide - NP_990402
swissprot - A0A1D5PIS7
swissprot - O42254
Ensembl - ENSGALG00000041204
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 igf2bp1ENSDARG00000061478Danio rerio
 Q9NZI8ENSG00000159217Homo sapiens
 O88477ENSMUSG00000013415Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5ZLP8 / IGF2BP3 / Insulin-like growth factor 2 mRNA-binding protein 3 / O00425* / Q9CPN8*ENSGALG0000001096169
IGF2BP2 / insulin like growth factor 2 mRNA binding protein 2 / Q5SF07* / Q9Y6M1*ENSGALG0000003319564


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0010610 regulation of mRNA stability involved in response to stress IEA
 biological_processGO:0010976 positive regulation of neuron projection development IMP
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0022013 pallium cell proliferation in forebrain IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0070934 CRD-mediated mRNA stabilization IEA
 biological_processGO:0097150 neuronal stem cell population maintenance IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030175 filopodium IDA
 cellular_componentGO:0030426 growth cone IDA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0070937 CRD-mediated mRNA stability complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IMP
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA
 molecular_functionGO:0045182 translation regulator activity IEA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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