ENSGALG00000041861


Gallus gallus

Features
Gene ID: ENSGALG00000041861
  
Biological name :TCTN1
  
Synonyms : TCTN1 / tectonic family member 1
  
Possible biological names infered from orthology : Q2MV58 / Q8BZ64 / Tectonic-1
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 6020787
Gene end: 6030114
  
Corresponding Affymetrix probe sets: GgaAffx.20808.1.S1_at (Chicken Array)   GgaAffx.2816.1.S1_at (Chicken Array)   GgaAffx.2816.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055526
NCBI entrez gene - 416870     See in Manteia.
RefSeq - XM_004945580
RefSeq - XM_415162
swissprot - A0A1D5PRJ9
Ensembl - ENSGALG00000041861
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tctn1ENSDARG00000078447Danio rerio
 TCTN1ENSG00000204852Homo sapiens
 Tctn1ENSMUSG00000038593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TCTN3 / tectonic-3 / Q6NUS6* / Q8R2Q6* / tectonic family member 3*ENSGALG0000001051726


Protein motifs (from Interpro)
Interpro ID Name
 IPR011677  Domain of unknown function DUF1619


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001841 neural tube formation IEA
 biological_processGO:0008589 regulation of smoothened signaling pathway IEA
 biological_processGO:0021523 somatic motor neuron differentiation IEA
 biological_processGO:0021537 telencephalon development IEA
 biological_processGO:0021904 dorsal/ventral neural tube patterning IEA
 biological_processGO:0021956 central nervous system interneuron axonogenesis IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:1904491 protein localization to ciliary transition zone IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0035869 ciliary transition zone IEA
 cellular_componentGO:0036038 MKS complex IEA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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