ENSGALG00000042088


Gallus gallus

Features
Gene ID: ENSGALG00000042088
  
Biological name :ATG2B
  
Synonyms : ATG2B / autophagy related 2B
  
Possible biological names infered from orthology : Autophagy-related B / Q80XK6 / Q96BY7
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 46490362
Gene end: 46531868
  
Corresponding Affymetrix probe sets: Gga.11347.1.A1_at (Chicken Array)   Gga.11347.1.S1_s_at (Chicken Array)   Gga.12513.1.S1_at (Chicken Array)   Gga.19702.1.S1_at (Chicken Array)   GgaAffx.23447.1.S1_at (Chicken Array)   GgaAffx.7027.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047769
Ensembl peptide - ENSGALP00000048544
NCBI entrez gene - 423441     See in Manteia.
RefSeq - XM_015287777
swissprot - A0A1D5P505
swissprot - A0A1D5P759
Ensembl - ENSGALG00000042088
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg2bENSDARG00000097650Danio rerio
 ATG2BENSG00000066739Homo sapiens
 Atg2bENSMUSG00000041341Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015412  Autophagy-related, C-terminal
 IPR026849  Autophagy-related protein 2
 IPR026854  Vacuolar protein sorting-associated protein 13, N-terminal domain
 IPR026885  Autophagy-related protein 2 CAD motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IEA
 cellular_componentGO:0005654 nucleoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr