ENSMUSG00000041341


Mus musculus

Features
Gene ID: ENSMUSG00000041341
  
Biological name :Atg2b
  
Synonyms : Atg2b / Autophagy-related B / Q80XK6
  
Possible biological names infered from orthology : autophagy related 2B / Q96BY7
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: E
Gene start: 105616136
Gene end: 105685211
  
Corresponding Affymetrix probe sets: 10402519 (MoGene1.0st)   10402542 (MoGene1.0st)   1424702_a_at (Mouse Genome 430 2.0 Array)   1435501_at (Mouse Genome 430 2.0 Array)   1444474_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037441
Ensembl peptide - ENSMUSP00000152527
NCBI entrez gene - 76559     See in Manteia.
MGI - MGI:1923809
RefSeq - XM_006516361
RefSeq - NM_029654
RefSeq - XM_006516360
RefSeq Peptide - NP_083930
swissprot - Q80XK6
swissprot - A0A1Y7VNP1
Ensembl - ENSMUSG00000041341
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg2bENSDARG00000097650Danio rerio
 ATG2BENSGALG00000042088Gallus gallus
 ATG2BENSG00000066739Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Atg2a / Q6P4T0 / Autophagy-related A / Q2TAZ0* / autophagy related 2A*ENSMUSG0000002477340


Protein motifs (from Interpro)
Interpro ID Name
 IPR015412  Autophagy-related, C-terminal
 IPR026849  Autophagy-related protein 2
 IPR026854  Vacuolar protein sorting-associated protein 13, N-terminal domain
 IPR026885  Autophagy-related protein 2 CAD motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0044804 autophagy of nucleus IBA
 cellular_componentGO:0000407 phagophore assembly site IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0034045 phagophore assembly site membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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