ENSGALG00000042415


Gallus gallus

Features
Gene ID: ENSGALG00000042415
  
Biological name :BBS2
  
Synonyms : Bardet-Biedl syndrome 2 protein / BBS2
  
Possible biological names infered from orthology : Bardet-Biedl syndrome 2 / Bardet-Biedl syndrome 2 protein homolog / Q9BXC9 / Q9CWF6
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 2188618
Gene end: 2203659
  
Corresponding Affymetrix probe sets: Gga.16275.2.S1_s_at (Chicken Array)   GgaAffx.21504.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057299
NCBI entrez gene - 415694     See in Manteia.
RefSeq - NM_001012777
RefSeq Peptide - NP_001012795
swissprot - A0A1D5PWG7
Ensembl - ENSGALG00000042415
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bbs2ENSDARG00000041621Danio rerio
 BBS2ENSG00000125124Homo sapiens
 Bbs2ENSMUSG00000031755Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016616  Bardet-Biedl syndrome 2 protein
 IPR017986  WD40-repeat-containing domain
 IPR029333  Ciliary BBSome complex subunit 2, C-terminal domain
 IPR029429  Ciliary BBSome complex subunit 2, middle region
 IPR029430  Ciliary BBSome complex subunit 2, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007288 sperm axoneme assembly IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0008104 protein localization IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0014824 artery smooth muscle contraction IEA
 biological_processGO:0021756 striatum development IEA
 biological_processGO:0021766 hippocampus development IEA
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0030534 adult behavior IEA
 biological_processGO:0033210 leptin-mediated signaling pathway IEA
 biological_processGO:0033365 protein localization to organelle IEA
 biological_processGO:0038108 negative regulation of appetite by leptin-mediated signaling pathway IEA
 biological_processGO:0040015 negative regulation of multicellular organism growth IEA
 biological_processGO:0040018 positive regulation of multicellular organism growth IEA
 biological_processGO:0042311 vasodilation IEA
 biological_processGO:0043001 Golgi to plasma membrane protein transport IEA
 biological_processGO:0044321 response to leptin IEA
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0045494 photoreceptor cell maintenance IEA
 biological_processGO:0048854 brain morphogenesis IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0060296 regulation of cilium beat frequency involved in ciliary motility IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005902 microvillus IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0032420 stereocilium IEA
 cellular_componentGO:0034464 BBSome IEA
 cellular_componentGO:0036064 ciliary basal body IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0060170 ciliary membrane IEA
 molecular_functionGO:0001103 RNA polymerase II repressing transcription factor binding IEA


Pathways (from Reactome)
Pathway description
BBSome-mediated cargo-targeting to cilium


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr