ENSGALG00000042766


Gallus gallus

Features
Gene ID: ENSGALG00000042766
  
Biological name :TRAPPC9
  
Synonyms : trafficking protein particle complex 9 / TRAPPC9
  
Possible biological names infered from orthology : Q3U0M1 / Q96Q05 / Trafficking protein particle complex subunit 9
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 145515969
Gene end: 145738890
  
Corresponding Affymetrix probe sets: GgaAffx.10344.1.S1_at (Chicken Array)   GgaAffx.10344.2.S1_at (Chicken Array)   GgaAffx.10344.2.S1_s_at (Chicken Array)   GgaAffx.10344.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044597
NCBI entrez gene - 420312     See in Manteia.
RefSeq - XM_004940062
RefSeq - XM_004940064
RefSeq - XM_015283239
swissprot - A0A1D5NW61
Ensembl - ENSGALG00000042766
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-218f9.10ENSDARG00000099118Danio rerio
 Q96Q05ENSG00000167632Homo sapiens
 Q3U0M1ENSMUSG00000047921Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG000000321033


Protein motifs (from Interpro)
Interpro ID Name
 IPR013935  TRAPP II complex, Trs120


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0051092 positive regulation of NF-kappaB transcription factor activity IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0030008 TRAPP complex IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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