ENSGALG00000043213


Gallus gallus

Features
Gene ID: ENSGALG00000043213
  
Biological name :CYP26C1
  
Synonyms : CYP26C1 / cytochrome P450 family 26 subfamily C member 1
  
Possible biological names infered from orthology : cytochrome P450, family 26, subfamily c, polypeptide 1 / Q6V0L0
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 20561818
Gene end: 20567803
  
Corresponding Affymetrix probe sets: Gga.17634.1.S1_at (Chicken Array)   Gga.19393.1.S1_s_at (Chicken Array)   GgaAffx.11272.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057965
NCBI entrez gene - 423806     See in Manteia.
RefSeq - XM_421678
swissprot - A0A1D5PYB5
Ensembl - ENSGALG00000043213
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyp26c1ENSDARG00000056029Danio rerio
 Q6V0L0ENSG00000187553Homo sapiens
 Cyp26c1ENSMUSG00000062432Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CYP26A1 / cytochrome P450 26A1 / O43174* / cytochrome P450 family 26 subfamily A member 1*ENSGALG0000003369534
CYP26B1 / cytochrome P450 family 26 subfamily B member 1 / Q811W2* / Q9NR63* / Cytochrome P450 26B1 *ENSGALG0000001610229
CYP51A1 / cytochrome P450 family 51 subfamily A member 1 / Cyp51* / Q16850* / Q8K0C4* / Lanosterol 14-alpha demethylase *ENSGALG0000000936516


Protein motifs (from Interpro)
Interpro ID Name
 IPR001128  Cytochrome P450
 IPR002403  Cytochrome P450, E-class, group IV
 IPR017972  Cytochrome P450, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0014032 neural crest cell development IEA
 biological_processGO:0034653 retinoic acid catabolic process IEA
 biological_processGO:0048284 organelle fusion IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0001972 retinoic acid binding IEA
 molecular_functionGO:0004497 monooxygenase activity IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008401 retinoic acid 4-hydroxylase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0020037 heme binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Vitamins
RA biosynthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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