ENSGALG00000043650


Gallus gallus

Features
Gene ID: ENSGALG00000043650
  
Biological name :GFI1
  
Synonyms : GFI1 / growth factor independent 1 transcriptional repressor
  
Possible biological names infered from orthology : Q99684
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 14182289
Gene end: 14191786
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000055500
Ensembl peptide - ENSGALP00000062420
Ensembl peptide - ENSGALP00000060272
NCBI entrez gene - 429088     See in Manteia.
RefSeq - XM_015290692
swissprot - A0A1L1RUC7
swissprot - A0A1L1RNC9
swissprot - A0A1D5PRH3
Ensembl - ENSGALG00000043650
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gfi1aaENSDARG00000020746Danio rerio
 gfi1abENSDARG00000044457Danio rerio
 GFI1ENSG00000162676Homo sapiens
 Gfi1ENSMUSG00000029275Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GFI1B / O42409 / Zinc finger protein Gfi-1b / O70237* / Q5VTD9* / growth factor independent 1B transcriptional repressor*ENSGALG0000000347846
FEZF1 / FEZ family zinc finger 1 / A0PJY2* / Q0VDQ9* / Fez family zinc finger protein 1 *ENSGALG0000000894125
FEZF2 / FEZ family zinc finger 2 / Q8TBJ5* / Q9ESP5* / Fez family zinc finger protein 2 *ENSGALG0000000718422


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR029840  Zinc finger protein Gfi-1/1b


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010956 negative regulation of calcidiol 1-monooxygenase activity IEA
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0030097 hemopoiesis IEA
 biological_processGO:0034121 regulation of toll-like receptor signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0051569 regulation of histone H3-K4 methylation IEA
 biological_processGO:0070105 positive regulation of interleukin-6-mediated signaling pathway IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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