ENSMUSG00000001674


Mus musculus

Features
Gene ID: ENSMUSG00000001674
  
Biological name :Ddx18
  
Synonyms : ATP-dependent RNA helicase DDX18 / Ddx18 / Q8K363
  
Possible biological names infered from orthology : DEAD-box helicase 18 / Q9NVP1
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: E2.3
Gene start: 121553835
Gene end: 121567989
  
Corresponding Affymetrix probe sets: 10357292 (MoGene1.0st)   10546805 (MoGene1.0st)   1416070_a_at (Mouse Genome 430 2.0 Array)   1416071_at (Mouse Genome 430 2.0 Array)   1456000_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114149
Ensembl peptide - ENSMUSP00000001724
NCBI entrez gene - 66942     See in Manteia.
MGI - MGI:1914192
RefSeq - NM_025860
RefSeq - XM_006529794
RefSeq Peptide - NP_080136
swissprot - F6ZX28
swissprot - B2RUM8
swissprot - Q8K363
Ensembl - ENSMUSG00000001674
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx18ENSDARG00000030789Danio rerio
 DDX18ENSGALG00000012147Gallus gallus
 DDX18ENSG00000088205Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR025313  Domain of unknown function DUF4217
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 biological_processGO:0071392 cellular response to estradiol stimulus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome ISO
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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