ENSMUSG00000002006


Mus musculus

Features
Gene ID: ENSMUSG00000002006
  
Biological name :Pdzd4
  
Synonyms : Pdzd4 / PDZ domain-containing protein 4 / Q9QY39
  
Possible biological names infered from orthology : PDZ domain containing 4 / Q76G19
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A7.3
Gene start: 73793359
Gene end: 73824969
  
Corresponding Affymetrix probe sets: 10605104 (MoGene1.0st)   1435457_at (Mouse Genome 430 2.0 Array)   1443120_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000002080
Ensembl peptide - ENSMUSP00000110081
NCBI entrez gene - 245469     See in Manteia.
MGI - MGI:2443483
RefSeq - XM_006528022
RefSeq - NM_001029868
RefSeq - NM_001290540
RefSeq - XM_006528017
RefSeq - XM_006528020
RefSeq - XM_006528021
RefSeq Peptide - NP_001025039
RefSeq Peptide - NP_001277469
swissprot - A2AFG3
swissprot - Q9QY39
Ensembl - ENSMUSG00000002006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CT583651.2ENSDARG00000098823Danio rerio
 PDZD4ENSDARG00000090564Danio rerio
 PDZD4ENSG00000067840Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pdzrn3 / Q69ZS0 / E3 ubiquitin-protein ligase PDZRN3 / Q9UPQ7* / PDZ domain containing ring finger 3*ENSMUSG0000003535749
Pdzrn4 / PDZ domain containing ring finger 4 / Q6ZMN7*ENSMUSG0000003621846


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005938 cell cortex IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: T/tbtm
Genetic Background: involves: C57BL/6 * MOL-NIS

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr