ENSMUSG00000002500


Mus musculus

Features
Gene ID: ENSMUSG00000002500
  
Biological name :Rpl3l
  
Synonyms : ribosomal protein L3-like / Rpl3l
  
Possible biological names infered from orthology : Q92901
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: A3.3
Gene start: 24727820
Gene end: 24736143
  
Corresponding Affymetrix probe sets: 10442584 (MoGene1.0st)   1449398_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038326
Ensembl peptide - ENSMUSP00000129325
Ensembl peptide - ENSMUSP00000138489
NCBI entrez gene - 66211     See in Manteia.
MGI - MGI:1913461
RefSeq - XM_017317609
RefSeq - NM_001163945
RefSeq - NM_025425
RefSeq - XM_011246569
RefSeq Peptide - NP_079701
RefSeq Peptide - NP_001157417
swissprot - Q9CQ09
swissprot - S4R242
swissprot - E9PWZ3
Ensembl - ENSMUSG00000002500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPL3LENSGALG00000005458Gallus gallus
 RPL3LENSG00000140986Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rpl3 / P27659 / 60S ribosomal protein L3 / P39023* / ribosomal protein L3*ENSMUSG0000006003675


Protein motifs (from Interpro)
Interpro ID Name
 IPR000597  Ribosomal protein L3
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR019926  Ribosomal protein L3, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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