ENSMUSG00000003166


Mus musculus

Features
Gene ID: ENSMUSG00000003166
  
Biological name :Dgcr2
  
Synonyms : Dgcr2
  
Possible biological names infered from orthology : DiGeorge syndrome critical region gene 2 / P98153
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: A3
Gene start: 17839482
Gene end: 17894145
  
Corresponding Affymetrix probe sets: 10438232 (MoGene1.0st)   1421809_at (Mouse Genome 430 2.0 Array)   1421810_at (Mouse Genome 430 2.0 Array)   1435276_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000112783
Ensembl peptide - ENSMUSP00000113506
Ensembl peptide - ENSMUSP00000012152
Ensembl peptide - ENSMUSP00000064603
NCBI entrez gene - 13356     See in Manteia.
MGI - MGI:892866
RefSeq - NM_001109750
RefSeq - NM_010048
RefSeq Peptide - NP_001103220
RefSeq Peptide - NP_034178
swissprot - Q8C2R4
swissprot - A0A0R4J1M6
swissprot - Q6P5A9
swissprot - E9QNU3
Ensembl - ENSMUSG00000003166
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dgcr2ENSDARG00000042962Danio rerio
 DGCR2ENSGALG00000005891Gallus gallus
 DGCR2ENSG00000070413Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm20518 / DGCR2* / P98153* / DiGeorge syndrome critical region gene 2*ENSMUSG0000009247099


Protein motifs (from Interpro)
Interpro ID Name
 IPR001007  VWFC domain
 IPR001304  C-type lectin-like
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR034010  DGCR2-like, C-type lectin-like domain
 IPR036055  LDL receptor-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000689 abnormal spleen morphology "atypical structure of the organ that functions to filter blood and to store red corpuscles and platelets" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:27463]
Show

Allelic Composition: Dbn1tm1b(KOMP)Wtsi/Dbn1+
Genetic Background: C57BL/6N-Dbn1tm1b(KOMP)Wtsi/Bay

 MP:0005293 impaired glucose tolerance "less than the normal response to oral consumption or intravenous injection of specified amounts of glucose and indicative of insulin resistance; measured by determining whole blood or plasma sugar level in a fasting state before and after taking glucose at specified intervals" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Dbn1tm1b(KOMP)Wtsi/Dbn1+
Genetic Background: C57BL/6N-Dbn1tm1b(KOMP)Wtsi/Bay

 MP:0010123 increased bone mineral content "elevation in the amount (usually in grams/cm) of bone mineral divided by a bone-scanned area" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Dbn1tm1b(KOMP)Wtsi/Dbn1+
Genetic Background: C57BL/6N-Dbn1tm1b(KOMP)Wtsi/Bay

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr