ENSMUSG00000003234


Mus musculus

Features
Gene ID: ENSMUSG00000003234
  
Biological name :Abcf3
  
Synonyms : Abcf3 / ATP-binding cassette, sub-family F (GCN20), member 3 / Q8K268
  
Possible biological names infered from orthology : ATP binding cassette subfamily F member 3 / Q9NUQ8
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: A3
Gene start: 20548577
Gene end: 20561379
  
Corresponding Affymetrix probe sets: 10434396 (MoGene1.0st)   1426747_at (Mouse Genome 430 2.0 Array)   1426748_s_at (Mouse Genome 430 2.0 Array)   1452177_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000003319
NCBI entrez gene - 27406     See in Manteia.
MGI - MGI:1351656
RefSeq - NM_013852
RefSeq Peptide - NP_038880
swissprot - Q8K268
Ensembl - ENSMUSG00000003234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCF3ENSDARG00000089705Danio rerio
 ABCF3ENSGALG00000008480Gallus gallus
 ABCF3ENSG00000161204Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Abcf1 / Q6P542 / ATP-binding cassette, sub-family F (GCN20), member 1 / Q8NE71* / ATP binding cassette subfamily F member 1*ENSMUSG0000003876238


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR032781  ABC-transporter extension domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051607 defense response to virus IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0045296 cadherin binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr