ENSMUSG00000003778


Mus musculus

Features
Gene ID: ENSMUSG00000003778
  
Biological name :Brd8
  
Synonyms : Brd8 / Bromodomain-containing protein 8 / Q8R3B7
  
Possible biological names infered from orthology : bromodomain containing 8 / Q9H0E9
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: B1
Gene start: 34598615
Gene end: 34624601
  
Corresponding Affymetrix probe sets: 10458138 (MoGene1.0st)   1427192_a_at (Mouse Genome 430 2.0 Array)   1427193_at (Mouse Genome 430 2.0 Array)   1429526_at (Mouse Genome 430 2.0 Array)   1451137_a_at (Mouse Genome 430 2.0 Array)   1452350_at (Mouse Genome 430 2.0 Array)   1456351_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000111432
Ensembl peptide - ENSMUSP00000003876
Ensembl peptide - ENSMUSP00000095229
Ensembl peptide - ENSMUSP00000111431
NCBI entrez gene - 78656     See in Manteia.
MGI - MGI:1925906
RefSeq - XM_011247042
RefSeq - XM_006526355
RefSeq - XM_006526358
RefSeq - XM_006526359
RefSeq - XM_011247038
RefSeq - XM_011247039
RefSeq - XM_011247040
RefSeq - NM_001289606
RefSeq - NM_001289607
RefSeq - NM_030147
RefSeq - XM_006526354
RefSeq Peptide - NP_084423
RefSeq Peptide - NP_001276535
RefSeq Peptide - NP_001276536
swissprot - D3YZC8
swissprot - Q8R3B7
swissprot - D3YZC7
Ensembl - ENSMUSG00000003778
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brd8ENSDARG00000025071Danio rerio
 BRD8ENSDARG00000055999Danio rerio
 BRD8ENSGALG00000037646Gallus gallus
 BRD8ENSG00000112983Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
4933408B17Rik / RIKEN cDNA 4933408B17 geneENSMUSG0000004935712


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR036427  Bromodomain-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006325 chromatin organization IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0040008 regulation of growth IEA
 biological_processGO:0043967 histone H4 acetylation ISO
 biological_processGO:0043968 histone H2A acetylation ISO
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0000812 Swr1 complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0035267 NuA4 histone acetyltransferase complex IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Asxl1tm1a(EUCOMM)Wtsi/Asxl1+
Genetic Background: B6Dnk;B6Brd;B6N-Asxl1tm1a(EUCOMM)Wtsi Tyrc-Brd/WtsiH

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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