ENSMUSG00000003848


Mus musculus

Features
Gene ID: ENSMUSG00000003848
  
Biological name :Nob1
  
Synonyms : NIN1/RPN12 binding protein 1 homolog / Nob1 / Q8BW10
  
Possible biological names infered from orthology : NIN1/PSMD8 binding protein 1 homolog / Q9ULX3
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: D3
Gene start: 107412486
Gene end: 107425051
  
Corresponding Affymetrix probe sets: 10581547 (MoGene1.0st)   1454957_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000129298
Ensembl peptide - ENSMUSP00000003946
Ensembl peptide - ENSMUSP00000126868
NCBI entrez gene - 67619     See in Manteia.
MGI - MGI:1914869
RefSeq - NM_026277
RefSeq Peptide - NP_080553
swissprot - Q8BW10
swissprot - E9PW56
swissprot - F6YBB8
swissprot - Q148S3
Ensembl - ENSMUSG00000003848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nob1ENSDARG00000016080Danio rerio
 NOB1ENSGALG00000000693Gallus gallus
 NOB1ENSG00000141101Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002716  PIN domain
 IPR014881  Nin one binding (NOB1) Zn-ribbon-like
 IPR017117  Ribonuclease Nob1, eukaryote
 IPR029060  PIN-like domain superfamily
 IPR033411  Ribonuclease, PIN domain
 IPR033461  Putative WW-binding domain and destruction box
 IPR036283  NOB1 zinc finger-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000469 cleavage involved in rRNA processing IBA
 biological_processGO:0007601 visual perception IMP
 biological_processGO:0030490 maturation of SSU-rRNA ISA
 biological_processGO:0042274 ribosomal small subunit biogenesis ISA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus ISA
 cellular_componentGO:0005730 nucleolus ISA
 cellular_componentGO:0005737 cytoplasm ISA
 cellular_componentGO:0030688 preribosome, small subunit precursor IBA
 molecular_functionGO:0004521 endoribonuclease activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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