ENSMUSG00000004071


Mus musculus

Features
Gene ID: ENSMUSG00000004071
  
Biological name :Cdip1
  
Synonyms : Cdip1 / Mus musculus cell death inducing Trp53 target 1 (Cdip1), transcript variant 5, mRNA. / Q9DB75
  
Possible biological names infered from orthology : cell death inducing p53 target 1 / Q9H305
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: A1
Gene start: 4750348
Gene end: 4790292
  
Corresponding Affymetrix probe sets: 10437443 (MoGene1.0st)   1447951_at (Mouse Genome 430 2.0 Array)   1448193_at (Mouse Genome 430 2.0 Array)   1453790_at (Mouse Genome 430 2.0 Array)   1460172_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000004173
Ensembl peptide - ENSMUSP00000113618
Ensembl peptide - ENSMUSP00000113889
Ensembl peptide - ENSMUSP00000120143
NCBI entrez gene - 66626     See in Manteia.
MGI - MGI:1913876
RefSeq - XM_011245996
RefSeq - NM_001358078
RefSeq - NM_001358079
RefSeq - NM_001358080
RefSeq - NM_001358082
RefSeq - NM_025670
RefSeq - XM_006522467
RefSeq - XM_006522468
RefSeq Peptide - NP_001345007
RefSeq Peptide - NP_001345008
RefSeq Peptide - NP_079946
RefSeq Peptide - NP_001345009
RefSeq Peptide - NP_001345011
swissprot - Q9DB75
swissprot - F6X7Q6
Ensembl - ENSMUSG00000004071
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdip1ENSDARG00000076118Danio rerio
 CDIP1ENSGALG00000036502Gallus gallus
 CDIP1ENSG00000089486Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Litaf / Q9JLJ0 / Lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog / Q99732* / lipopolysaccharide induced TNF factor*ENSMUSG0000002250026
Gm5767 / predicted 5767 / AC022167.5*ENSMUSG0000010725216


Protein motifs (from Interpro)
Interpro ID Name
 IPR006629  LPS-induced tumour necrosis factor alpha factor
 IPR037519  LITAF domain containing protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process ISO
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway ISO
 biological_processGO:0042771 intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0098560 cytoplasmic side of late endosome membrane ISO
 cellular_componentGO:0098574 cytoplasmic side of lysosomal membrane ISO
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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